WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y37E11AL.3.1 Sequence Name  Y37E11AL.3.1
Length (nt)  1095   Chromosome Location  IV: 3694935-3698436
Chromosome . Primary Identifier  IV Chromosome Location . Start  3694935
Chromosome Location . End  3698436 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y37E11AL.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021359 Y37E11AL.3 Y37E11AL.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y37E11AL.3 Y37E11AL.3 918   IV: 3694943-3695011

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y37E11AL.3.1 3694935 3698436 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon117512   77   IV: 3694935-3695011 Caenorhabditis elegans
Exon117513   75   IV: 3695059-3695133 Caenorhabditis elegans
Exon117514   186   IV: 3695214-3695399 Caenorhabditis elegans
Exon117515   161   IV: 3695739-3695899 Caenorhabditis elegans
Exon117516   292   IV: 3696780-3697071 Caenorhabditis elegans
Exon117517   304   IV: 3698133-3698436 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y37E11AL.3.1 3694935 3698436 1

1 Sequence

Length
1095

1 Sequence Ontology Term

Identifier Name Description
transcript