WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y37E11AL.1.1 Sequence Name  Y37E11AL.1.1
Length (nt)  1332   Chromosome Location  IV: 3709500-3715523
Chromosome . Primary Identifier  IV Chromosome Location . Start  3709500
Chromosome Location . End  3715523 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y37E11AL.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021357 Y37E11AL.1 Y37E11AL.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y37E11AL.1 Y37E11AL.1 1155   IV: 3709515-3709570

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y37E11AL.1.1 3709500 3715523 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon117531   71   IV: 3709500-3709570 Caenorhabditis elegans
Exon117532   99   IV: 3710518-3710616 Caenorhabditis elegans
Exon117533   76   IV: 3711185-3711260 Caenorhabditis elegans
Exon117535   140   IV: 3712559-3712698 Caenorhabditis elegans
Exon117536   455   IV: 3713522-3713976 Caenorhabditis elegans
Exon117537   164   IV: 3714744-3714907 Caenorhabditis elegans
Exon117538   327   IV: 3715197-3715523 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y37E11AL.1.1 3709500 3715523 1

1 Sequence

Length
1332

1 Sequence Ontology Term

Identifier Name Description
transcript