WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y37E11AR.3a Sequence Name  Y37E11AR.3a
Length (nt)  1068   Chromosome Location  IV: 3735894-3736010
Chromosome . Primary Identifier  IV Chromosome Location . Start  3735894
Chromosome Location . End  3736010
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y37E11AR.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE27604 NAPE-2, isoform a 40.2 355 Caenorhabditis elegans
 

Other

1 RNAi

WormBase ID
WBRNAi00055910

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y37E11AR.3a 3735894 3736010 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021370 nape-2 Y37E11AR.3 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y37E11AR.3a 3735894 3736010 -1
CDS:Y37E11AR.3a 3736073 3736190 -1
CDS:Y37E11AR.3a 3736238 3736597 -1
CDS:Y37E11AR.3a 3737389 3737793 -1
CDS:Y37E11AR.3a 3737844 3737911 -1

1 Sequence

Length
1068

1 Sequence Ontology Term

Identifier Name Description
CDS  

4 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y37E11AR.3a.4 Y37E11AR.3a.4 1500   IV: 3735470-3737919
Transcript:Y37E11AR.3a.3 Y37E11AR.3a.3 1222   IV: 3735845-3738061
Transcript:Y37E11AR.3a.2 Y37E11AR.3a.2 1338   IV: 3735845-3738924
Transcript:Y37E11AR.3a.1 Y37E11AR.3a.1 1266   IV: 3735845-3738925