WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y37E11AR.5a.1 Sequence Name  Y37E11AR.5a.1
Length (nt)  1668   Chromosome Location  IV: 3748210-3751101
Chromosome . Primary Identifier  IV Chromosome Location . Start  3748210
Chromosome Location . End  3751101 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y37E11AR.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021372 ugt-45 Y37E11AR.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y37E11AR.5a Y37E11AR.5a 1584   IV: 3748291-3748793

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y37E11AR.5a.1 3748210 3751101 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon117629   584   IV: 3748210-3748793 Caenorhabditis elegans
Exon117631   358   IV: 3749512-3749869 Caenorhabditis elegans
Exon117633   359   IV: 3749916-3750274 Caenorhabditis elegans
Exon117635   141   IV: 3750561-3750701 Caenorhabditis elegans
Exon117637   76   IV: 3750754-3750829 Caenorhabditis elegans
Exon117640   150   IV: 3750952-3751101 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y37E11AR.5a.1 3748210 3751101 -1

1 Sequence

Length
1668

1 Sequence Ontology Term

Identifier Name Description
transcript