WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y37E11AR.6a.1 Sequence Name  Y37E11AR.6a.1
Length (nt)  1083   Chromosome Location  IV: 3761195-3766826
Chromosome . Primary Identifier  IV Chromosome Location . Start  3761195
Chromosome Location . End  3766826 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y37E11AR.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006869 vab-2 Y37E11AR.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y37E11AR.6a Y37E11AR.6a 840   IV: 3761432-3761511

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y37E11AR.6a.1 3761195 3766826 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon117662   317   IV: 3761195-3761511 Caenorhabditis elegans
Exon117664   387   IV: 3761582-3761968 Caenorhabditis elegans
Exon117667   266   IV: 3762502-3762767 Caenorhabditis elegans
Exon117668   113   IV: 3766714-3766826 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y37E11AR.6a.1 3761195 3766826 -1

1 Sequence

Length
1083

1 Sequence Ontology Term

Identifier Name Description
transcript