WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K09B3.1a.1 Sequence Name  K09B3.1a.1
Length (nt)  681   Chromosome Location  IV: 3794737-3796318
Chromosome . Primary Identifier  IV Chromosome Location . Start  3794737
Chromosome Location . End  3796318 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K09B3.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019545 K09B3.1 K09B3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K09B3.1a K09B3.1a 558   IV: 3794796-3794820

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K09B3.1a.1 3794737 3796318 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon117690   84   IV: 3794737-3794820 Caenorhabditis elegans
Exon117692   151   IV: 3795193-3795343 Caenorhabditis elegans
Exon117695   98   IV: 3795736-3795833 Caenorhabditis elegans
Exon117697   60   IV: 3795882-3795941 Caenorhabditis elegans
Exon117700   135   IV: 3795989-3796123 Caenorhabditis elegans
Exon117704   153   IV: 3796166-3796318 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K09B3.1a.1 3794737 3796318 1

1 Sequence

Length
681

1 Sequence Ontology Term

Identifier Name Description
transcript