WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F37C4.1.1 Sequence Name  F37C4.1.1
Length (nt)  2034   Chromosome Location  IV: 3889263-3892563
Chromosome . Primary Identifier  IV Chromosome Location . Start  3889263
Chromosome Location . End  3892563 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F37C4.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018141 oac-21 F37C4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F37C4.1 F37C4.1 2034   IV: 3889263-3889393

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F37C4.1.1 3889263 3892563 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon117922   131   IV: 3889263-3889393 Caenorhabditis elegans
Exon117923   265   IV: 3889444-3889708 Caenorhabditis elegans
Exon117924   139   IV: 3890088-3890226 Caenorhabditis elegans
Exon117925   87   IV: 3890274-3890360 Caenorhabditis elegans
Exon117926   214   IV: 3890408-3890621 Caenorhabditis elegans
Exon117927   167   IV: 3890868-3891034 Caenorhabditis elegans
Exon117928   225   IV: 3891084-3891308 Caenorhabditis elegans
Exon117929   113   IV: 3891350-3891462 Caenorhabditis elegans
Exon117930   127   IV: 3891511-3891637 Caenorhabditis elegans
Exon117931   112   IV: 3891684-3891795 Caenorhabditis elegans
Exon117932   211   IV: 3891854-3892064 Caenorhabditis elegans
Exon117933   243   IV: 3892321-3892563 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F37C4.1.1 3889263 3892563 1

1 Sequence

Length
2034

1 Sequence Ontology Term

Identifier Name Description
transcript