WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56D6.7.1 Sequence Name  F56D6.7.1
Length (nt)  969   Chromosome Location  IV: 3900504-3902326
Chromosome . Primary Identifier  IV Chromosome Location . Start  3900504
Chromosome Location . End  3902326 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56D6.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00023478 srz-62 F56D6.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56D6.7 F56D6.7 969   IV: 3900504-3900514

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F56D6.7.1 3900504 3902326 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon117947   11   IV: 3900504-3900514 Caenorhabditis elegans
Exon117948   142   IV: 3900597-3900738 Caenorhabditis elegans
Exon117949   107   IV: 3900782-3900888 Caenorhabditis elegans
Exon117950   280   IV: 3900959-3901238 Caenorhabditis elegans
Exon117951   162   IV: 3901851-3902012 Caenorhabditis elegans
Exon117952   267   IV: 3902060-3902326 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F56D6.7.1 3900504 3902326 1

1 Sequence

Length
969

1 Sequence Ontology Term

Identifier Name Description
transcript