WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F56D6.5a Sequence Name  F56D6.5a
Length (nt)  987   Chromosome Location  IV: 3915610-3915780
Chromosome . Primary Identifier  IV Chromosome Location . Start  3915610
Chromosome Location . End  3915780
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56D6.5a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE48941 SRZ-20, isoform a 38.4 328 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00048723
WBRNAi00015831

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F56D6.5a 3915610 3915780 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018973 srz-20 F56D6.5 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:F56D6.5a 3915610 3915780 1
CDS:F56D6.5a 3915843 3915955 1
CDS:F56D6.5a 3916008 3916311 1
CDS:F56D6.5a 3916360 3916521 1
CDS:F56D6.5a 3916595 3916818 1
CDS:F56D6.5a 3916889 3916901 1

1 Sequence

Length
987

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F56D6.5a.1 F56D6.5a.1 1183   IV: 3915596-3917083