WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56D6.5b.1 Sequence Name  F56D6.5b.1
Length (nt)  669   Chromosome Location  IV: 3916042-3916901
Chromosome . Primary Identifier  IV Chromosome Location . Start  3916042
Chromosome Location . End  3916901 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56D6.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018973 srz-20 F56D6.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56D6.5b F56D6.5b 669   IV: 3916042-3916311

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F56D6.5b.1 3916042 3916901 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon117966   270   IV: 3916042-3916311 Caenorhabditis elegans
Exon117968   162   IV: 3916360-3916521 Caenorhabditis elegans
Exon117970   224   IV: 3916595-3916818 Caenorhabditis elegans
Exon117971   13   IV: 3916889-3916901 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F56D6.5b.1 3916042 3916901 1

1 Sequence

Length
669

1 Sequence Ontology Term

Identifier Name Description
transcript