WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56D6.4.1 Sequence Name  F56D6.4.1
Length (nt)  1005   Chromosome Location  IV: 3919806-3921613
Chromosome . Primary Identifier  IV Chromosome Location . Start  3919806
Chromosome Location . End  3921613 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56D6.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018972 srz-19 F56D6.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56D6.4 F56D6.4 1005   IV: 3919806-3919994

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F56D6.4.1 3919806 3921613 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon118030   189   IV: 3919806-3919994 Caenorhabditis elegans
Exon118031   104   IV: 3920054-3920157 Caenorhabditis elegans
Exon118032   301   IV: 3920641-3920941 Caenorhabditis elegans
Exon118033   162   IV: 3921160-3921321 Caenorhabditis elegans
Exon118034   249   IV: 3921365-3921613 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F56D6.4.1 3919806 3921613 1

1 Sequence

Length
1005

1 Sequence Ontology Term

Identifier Name Description
transcript