WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56D6.2.2 Sequence Name  F56D6.2.2
Length (nt)  2050   Chromosome Location  IV: 3922165-3925039
Chromosome . Primary Identifier  IV Chromosome Location . Start  3922165
Chromosome Location . End  3925039 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56D6.2.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018971 clec-67 F56D6.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56D6.2 F56D6.2 1404   IV: 3922195-3922411

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F56D6.2.2 3922165 3925039 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon118036   247   IV: 3922165-3922411 Caenorhabditis elegans
Exon118038   276   IV: 3922710-3922985 Caenorhabditis elegans
Exon118040   184   IV: 3923033-3923216 Caenorhabditis elegans
Exon118042   94   IV: 3923264-3923357 Caenorhabditis elegans
Exon118044   234   IV: 3923606-3923839 Caenorhabditis elegans
Exon118046   145   IV: 3923887-3924031 Caenorhabditis elegans
Exon118048   98   IV: 3924079-3924176 Caenorhabditis elegans
Exon118050   122   IV: 3924221-3924342 Caenorhabditis elegans
Exon118052   650   IV: 3924390-3925039 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F56D6.2.2 3922165 3925039 1

1 Sequence

Length
2050

1 Sequence Ontology Term

Identifier Name Description
transcript