WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y46C8AM.1.3 Sequence Name  Y46C8AM.1.3
Length (nt)  720   Chromosome Location  IV: 3962947-3964384
Chromosome . Primary Identifier  IV Chromosome Location . Start  3962947
Chromosome Location . End  3964384 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y46C8AM.1.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00271795 Y46C8AM.1 Y46C8AM.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y46C8AM.1 Y46C8AM.1 483   IV: 3963616-3963832

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y46C8AM.1.3 3962947 3964384 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon118084   28   IV: 3962947-3962974 Caenorhabditis elegans
Exon118086   259   IV: 3963574-3963832 Caenorhabditis elegans
Exon118088   433   IV: 3963952-3964384 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y46C8AM.1.3 3962947 3964384 1

1 Sequence

Length
720

1 Sequence Ontology Term

Identifier Name Description
transcript