WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F47C12.4 Sequence Name  F47C12.4
Length (nt)  1728   Chromosome Location  IV: 3973368-3973517
Chromosome . Primary Identifier  IV Chromosome Location . Start  3973368
Chromosome Location . End  3973517
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F47C12.4

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE10676 CLEC-79 65.9 575 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00001939
WBRNAi00047638
WBRNAi00015178
WBRNAi00032433

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F47C12.4 3973368 3973517 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018548 clec-79 F47C12.4 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:F47C12.4 3973368 3973517 1
CDS:F47C12.4 3973569 3973905 1
CDS:F47C12.4 3973957 3974297 1
CDS:F47C12.4 3974674 3974763 1
CDS:F47C12.4 3974808 3975261 1
CDS:F47C12.4 3975308 3975663 1

1 Sequence

Length
1728

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F47C12.4.1 F47C12.4.1 1805   IV: 3973349-3975721