WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F47C12.5 Sequence Name  F47C12.5
Length (nt)  1026   Chromosome Location  IV: 3976429-3976926
Chromosome . Primary Identifier  IV Chromosome Location . Start  3976429
Chromosome Location . End  3976926
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F47C12.5

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE10678 SRH-220 38.7 341 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00047639
WBRNAi00015179

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F47C12.5 3976429 3976926 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005430 srh-220 F47C12.5 Caenorhabditis elegans

3 Locations


Feature . Primary Identifier
Start End Strand
CDS:F47C12.5 3976429 3976926 -1
CDS:F47C12.5 3977429 3977616 -1
CDS:F47C12.5 3977676 3978015 -1

1 Sequence

Length
1026

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F47C12.5.1 F47C12.5.1 1026   IV: 3976429-3978015