WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F47C12.8.1 Sequence Name  F47C12.8.1
Length (nt)  463   Chromosome Location  IV: 3998011-3998617
Chromosome . Primary Identifier  IV Chromosome Location . Start  3998011
Chromosome Location . End  3998617 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F47C12.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018551 F47C12.8 F47C12.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F47C12.8 F47C12.8 333   IV: 3998053-3998131

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F47C12.8.1 3998011 3998617 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon118150   121   IV: 3998011-3998131 Caenorhabditis elegans
Exon118151   92   IV: 3998178-3998269 Caenorhabditis elegans
Exon118152   100   IV: 3998319-3998418 Caenorhabditis elegans
Exon118153   150   IV: 3998468-3998617 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F47C12.8.1 3998011 3998617 -1

1 Sequence

Length
463

1 Sequence Ontology Term

Identifier Name Description
transcript