WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W02C12.2a.1 Sequence Name  W02C12.2a.1
Length (nt)  641   Chromosome Location  IV: 4005488-4007772
Chromosome . Primary Identifier  IV Chromosome Location . Start  4005488
Chromosome Location . End  4007772 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W02C12.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020929 W02C12.2 W02C12.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W02C12.2a W02C12.2a 303   IV: 4005846-4005900

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W02C12.2a.1 4005488 4007772 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon118169   192   IV: 4005488-4005679 Caenorhabditis elegans
Exon118170   154   IV: 4005747-4005900 Caenorhabditis elegans
Exon118172   120   IV: 4006590-4006709 Caenorhabditis elegans
Exon118174   86   IV: 4006758-4006843 Caenorhabditis elegans
Exon118176   89   IV: 4007684-4007772 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W02C12.2a.1 4005488 4007772 -1

1 Sequence

Length
641

1 Sequence Ontology Term

Identifier Name Description
transcript