WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W02C12.3d.1 Sequence Name  W02C12.3d.1
Length (nt)  2359   Chromosome Location  IV: 4014795-4027063
Chromosome . Primary Identifier  IV Chromosome Location . Start  4014795
Chromosome Location . End  4027063 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W02C12.3d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020930 hlh-30 W02C12.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W02C12.3d W02C12.3d 1395   IV: 4015759-4015929

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W02C12.3d.1 4014795 4027063 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon118187   1135   IV: 4014795-4015929 Caenorhabditis elegans
Exon118202   77   IV: 4016492-4016568 Caenorhabditis elegans
Exon118215   151   IV: 4016634-4016784 Caenorhabditis elegans
Exon118227   289   IV: 4016834-4017122 Caenorhabditis elegans
Exon118240   76   IV: 4017559-4017634 Caenorhabditis elegans
Exon118253   145   IV: 4017693-4017837 Caenorhabditis elegans
Exon118266   129   IV: 4018033-4018161 Caenorhabditis elegans
Exon118278   75   IV: 4018257-4018331 Caenorhabditis elegans
Exon118288   96   IV: 4018487-4018582 Caenorhabditis elegans
Exon118302   186   IV: 4026878-4027063 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W02C12.3d.1 4014795 4027063 -1

1 Sequence

Length
2359

1 Sequence Ontology Term

Identifier Name Description
transcript