WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W02C12.3h.2 Sequence Name  W02C12.3h.2
Length (nt)  2138   Chromosome Location  IV: 4014810-4018407
Chromosome . Primary Identifier  IV Chromosome Location . Start  4014810
Chromosome Location . End  4018407 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W02C12.3h.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020930 hlh-30 W02C12.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W02C12.3h W02C12.3h 1086   IV: 4015759-4015929

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W02C12.3h.2 4014810 4018407 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon118193   1120   IV: 4014810-4015929 Caenorhabditis elegans
Exon118207   77   IV: 4016492-4016568 Caenorhabditis elegans
Exon118220   151   IV: 4016634-4016784 Caenorhabditis elegans
Exon118233   289   IV: 4016834-4017122 Caenorhabditis elegans
Exon118246   76   IV: 4017559-4017634 Caenorhabditis elegans
Exon118259   145   IV: 4017693-4017837 Caenorhabditis elegans
Exon118272   129   IV: 4018033-4018161 Caenorhabditis elegans
Exon118283   151   IV: 4018257-4018407 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W02C12.3h.2 4014810 4018407 -1

1 Sequence

Length
2138

1 Sequence Ontology Term

Identifier Name Description
transcript