WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W02C12.3i.1 Sequence Name  W02C12.3i.1
Length (nt)  1422   Chromosome Location  IV: 4015759-4034784
Chromosome . Primary Identifier  IV Chromosome Location . Start  4015759
Chromosome Location . End  4034784 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W02C12.3i.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020930 hlh-30 W02C12.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W02C12.3i W02C12.3i 1422   IV: 4015759-4015929

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W02C12.3i.1 4015759 4034784 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon118196   171   IV: 4015759-4015929 Caenorhabditis elegans
Exon118208   77   IV: 4016492-4016568 Caenorhabditis elegans
Exon118221   151   IV: 4016634-4016784 Caenorhabditis elegans
Exon118234   289   IV: 4016834-4017122 Caenorhabditis elegans
Exon118247   76   IV: 4017559-4017634 Caenorhabditis elegans
Exon118260   145   IV: 4017693-4017837 Caenorhabditis elegans
Exon118273   129   IV: 4018033-4018161 Caenorhabditis elegans
Exon118282   75   IV: 4018257-4018331 Caenorhabditis elegans
Exon118293   96   IV: 4018487-4018582 Caenorhabditis elegans
Exon118305   186   IV: 4026878-4027063 Caenorhabditis elegans
Exon118310   27   IV: 4034758-4034784 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W02C12.3i.1 4015759 4034784 -1

1 Sequence

Length
1422

1 Sequence Ontology Term

Identifier Name Description
transcript