WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W02C12.3d.2 Sequence Name  W02C12.3d.2
Length (nt)  2555   Chromosome Location  IV: 4014793-4034951
Chromosome . Primary Identifier  IV Chromosome Location . Start  4014793
Chromosome Location . End  4034951 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W02C12.3d.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020930 hlh-30 W02C12.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W02C12.3d W02C12.3d 1395   IV: 4015759-4015929

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W02C12.3d.2 4014793 4034951 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon118240   1137   IV: 4014793-4015929 Caenorhabditis elegans
Exon118258   77   IV: 4016492-4016568 Caenorhabditis elegans
Exon118271   151   IV: 4016634-4016784 Caenorhabditis elegans
Exon118283   289   IV: 4016834-4017122 Caenorhabditis elegans
Exon118296   76   IV: 4017559-4017634 Caenorhabditis elegans
Exon118309   145   IV: 4017693-4017837 Caenorhabditis elegans
Exon118322   129   IV: 4018033-4018161 Caenorhabditis elegans
Exon118334   75   IV: 4018257-4018331 Caenorhabditis elegans
Exon118344   96   IV: 4018487-4018582 Caenorhabditis elegans
Exon118358   186   IV: 4026878-4027063 Caenorhabditis elegans
Exon118367   194   IV: 4034758-4034951 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W02C12.3d.2 4014793 4034951 -1

1 Sequence

Length
2555

1 Sequence Ontology Term

Identifier Name Description
transcript