WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W02C12.3c.1 Sequence Name  W02C12.3c.1
Length (nt)  2575   Chromosome Location  IV: 4014800-4028127
Chromosome . Primary Identifier  IV Chromosome Location . Start  4014800
Chromosome Location . End  4028127 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W02C12.3c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020930 hlh-30 W02C12.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W02C12.3c W02C12.3c 1575   IV: 4015759-4015929

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W02C12.3c.1 4014800 4028127 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon118246   1130   IV: 4014800-4015929 Caenorhabditis elegans
Exon118256   77   IV: 4016492-4016568 Caenorhabditis elegans
Exon118269   151   IV: 4016634-4016784 Caenorhabditis elegans
Exon118281   289   IV: 4016834-4017122 Caenorhabditis elegans
Exon118294   76   IV: 4017559-4017634 Caenorhabditis elegans
Exon118307   145   IV: 4017693-4017837 Caenorhabditis elegans
Exon118320   129   IV: 4018033-4018161 Caenorhabditis elegans
Exon118332   75   IV: 4018257-4018331 Caenorhabditis elegans
Exon118342   96   IV: 4018487-4018582 Caenorhabditis elegans
Exon118356   186   IV: 4026878-4027063 Caenorhabditis elegans
Exon118364   221   IV: 4027907-4028127 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W02C12.3c.1 4014800 4028127 -1

1 Sequence

Length
2575

1 Sequence Ontology Term

Identifier Name Description
transcript