WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W03D2.1c.1 Sequence Name  W03D2.1c.1
Length (nt)  1620   Chromosome Location  IV: 4075728-4077609
Chromosome . Primary Identifier  IV Chromosome Location . Start  4075728
Chromosome Location . End  4077609 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W03D2.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004157 pqn-75 W03D2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W03D2.1c W03D2.1c 1620   IV: 4075728-4075847

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W03D2.1c.1 4075728 4077609 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon118390   120   IV: 4075728-4075847 Caenorhabditis elegans
Exon118393   144   IV: 4075906-4076049 Caenorhabditis elegans
Exon118397   81   IV: 4076096-4076176 Caenorhabditis elegans
Exon118401   93   IV: 4076233-4076325 Caenorhabditis elegans
Exon118405   81   IV: 4076372-4076452 Caenorhabditis elegans
Exon118407   1101   IV: 4076509-4077609 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W03D2.1c.1 4075728 4077609 1

1 Sequence

Length
1620

1 Sequence Ontology Term

Identifier Name Description
transcript