WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F49F1.1.1 Sequence Name  F49F1.1.1
Length (nt)  964   Chromosome Location  IV: 4117732-4119179
Chromosome . Primary Identifier  IV Chromosome Location . Start  4117732
Chromosome Location . End  4119179 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49F1.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018643 drd-50 F49F1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F49F1.1 F49F1.1 798   IV: 4117803-4117918

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F49F1.1.1 4117732 4119179 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon118477   187   IV: 4117732-4117918 Caenorhabditis elegans
Exon118478   111   IV: 4117963-4118073 Caenorhabditis elegans
Exon118479   99   IV: 4118129-4118227 Caenorhabditis elegans
Exon118480   144   IV: 4118316-4118459 Caenorhabditis elegans
Exon118481   231   IV: 4118506-4118736 Caenorhabditis elegans
Exon118482   192   IV: 4118988-4119179 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F49F1.1.1 4117732 4119179 1

1 Sequence

Length
964

1 Sequence Ontology Term

Identifier Name Description
transcript