WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F49F1.5a Sequence Name  F49F1.5a
Length (nt)  480   Chromosome Location  IV: 4119501-4119597
Chromosome . Primary Identifier  IV Chromosome Location . Start  4119501
Chromosome Location . End  4119597
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49F1.5a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE17088 F49F1.5, isoform a 17.5 159 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00047880
WBRNAi00015344
WBRNAi00087733
WBRNAi00032559
WBRNAi00103374

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F49F1.5a 4119501 4119597 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018645 F49F1.5 F49F1.5 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:F49F1.5a 4119501 4119597 -1
CDS:F49F1.5a 4119739 4119891 -1
CDS:F49F1.5a 4119941 4120051 -1
CDS:F49F1.5a 4120272 4120390 -1

1 Sequence

Length
480

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F49F1.5a.1 F49F1.5a.1 530   IV: 4119460-4120399