WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F49F1.6a.1 Sequence Name  F49F1.6a.1
Length (nt)  955   Chromosome Location  IV: 4121342-4123166
Chromosome . Primary Identifier  IV Chromosome Location . Start  4121342
Chromosome Location . End  4123166 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49F1.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018646 mul-1 F49F1.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F49F1.6a F49F1.6a 780   IV: 4121371-4121467

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F49F1.6a.1 4121342 4123166 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon118490   126   IV: 4121342-4121467 Caenorhabditis elegans
Exon118492   186   IV: 4121605-4121790 Caenorhabditis elegans
Exon118494   147   IV: 4121841-4121987 Caenorhabditis elegans
Exon118496   111   IV: 4122029-4122139 Caenorhabditis elegans
Exon118499   114   IV: 4122265-4122378 Caenorhabditis elegans
Exon118500   271   IV: 4122896-4123166 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F49F1.6a.1 4121342 4123166 -1

1 Sequence

Length
955

1 Sequence Ontology Term

Identifier Name Description
transcript