WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K08D10.8.1 Sequence Name  K08D10.8.1
Length (nt)  1015   Chromosome Location  IV: 4162421-4164480
Chromosome . Primary Identifier  IV Chromosome Location . Start  4162421
Chromosome Location . End  4164480 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K08D10.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019531 scrm-5 K08D10.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K08D10.8 K08D10.8 912   IV: 4162522-4162746

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K08D10.8.1 4162421 4164480 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon118594   43   IV: 4162421-4162463 Caenorhabditis elegans
Exon118596   228   IV: 4162519-4162746 Caenorhabditis elegans
Exon118598   360   IV: 4162795-4163154 Caenorhabditis elegans
Exon118600   187   IV: 4164040-4164226 Caenorhabditis elegans
Exon118603   197   IV: 4164284-4164480 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K08D10.8.1 4162421 4164480 1

1 Sequence

Length
1015

1 Sequence Ontology Term

Identifier Name Description
transcript