WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K08D10.4.1 Sequence Name  K08D10.4.1
Length (nt)  771   Chromosome Location  IV: 4172076-4174016
Chromosome . Primary Identifier  IV Chromosome Location . Start  4172076
Chromosome Location . End  4174016 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K08D10.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004385 rnp-2 K08D10.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K08D10.4 K08D10.4 621   IV: 4172108-4172284

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K08D10.4.1 4172076 4174016 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon118616   209   IV: 4172076-4172284 Caenorhabditis elegans
Exon118617   63   IV: 4172334-4172396 Caenorhabditis elegans
Exon118618   221   IV: 4172473-4172693 Caenorhabditis elegans
Exon118619   278   IV: 4173739-4174016 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K08D10.4.1 4172076 4174016 1

1 Sequence

Length
771

1 Sequence Ontology Term

Identifier Name Description
transcript