WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00023279 Gene Name  F36A4.9
Sequence Name  ? F36A4.9 Organism  Caenorhabditis elegans
Automated Description  Is affected by eat-2 based on RNA-seq studies. Biotype  SO:0000336
Genetic Position  :± Length (nt)  ? 1003
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00023279

Genomics

0 Transcripts

 

Other

0 CDSs

0 RNAi Result

18 Allele

Public Name
gk963722
gk963908
gk963959
gk963960
tm10771
WBVar00572180
h10618
gk199704
gk199703
gk199702
gk199701
WBVar01515409
WBVar01515407
WBVar01515408
gk458668
gk543805
gk691300
WBVar01630637

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
WBGene00023279 4239853 4240855 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrIV_4240856..4241223   368 IV: 4240856-4241223 Caenorhabditis elegans

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly decreased expression in eat-2(ad1116) comparing to in N2 at 3-days post L4 adult hermaphrodite animals. DESeq2(v1.14.1), fold change > 2, p-value < 0.05 WBPaper00055354:eat-2(ad1116)_downregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier 		Start End Strand
WBGene00023279 4239853 4240855 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
1003

1 Sequence Ontology Term