WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F15E6.6.1 Sequence Name  F15E6.6.1
Length (nt)  3914   Chromosome Location  IV: 4278825-4284120
Chromosome . Primary Identifier  IV Chromosome Location . Start  4278825
Chromosome Location . End  4284120 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F15E6.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017487 F15E6.6 F15E6.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F15E6.6 F15E6.6 3771   IV: 4278966-4279497

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F15E6.6.1 4278825 4284120 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon118796   673   IV: 4278825-4279497 Caenorhabditis elegans
Exon118797   233   IV: 4279546-4279778 Caenorhabditis elegans
Exon118798   622   IV: 4279822-4280443 Caenorhabditis elegans
Exon118799   170   IV: 4280693-4280862 Caenorhabditis elegans
Exon118800   91   IV: 4280912-4281002 Caenorhabditis elegans
Exon118801   305   IV: 4281050-4281354 Caenorhabditis elegans
Exon118802   197   IV: 4281399-4281595 Caenorhabditis elegans
Exon118803   100   IV: 4281640-4281739 Caenorhabditis elegans
Exon118804   315   IV: 4281788-4282102 Caenorhabditis elegans
Exon118805   201   IV: 4282158-4282358 Caenorhabditis elegans
Exon118806   101   IV: 4282776-4282876 Caenorhabditis elegans
Exon118807   123   IV: 4282919-4283041 Caenorhabditis elegans
Exon118808   136   IV: 4283088-4283223 Caenorhabditis elegans
Exon118809   311   IV: 4283273-4283583 Caenorhabditis elegans
Exon118810   234   IV: 4283728-4283961 Caenorhabditis elegans
Exon118811   102   IV: 4284019-4284120 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F15E6.6.1 4278825 4284120 -1

1 Sequence

Length
3914

1 Sequence Ontology Term

Identifier Name Description
transcript