WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F15E6.9a.1 Sequence Name  F15E6.9a.1
Length (nt)  2008   Chromosome Location  IV: 4293574-4299083
Chromosome . Primary Identifier  IV Chromosome Location . Start  4293574
Chromosome Location . End  4299083 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F15E6.9a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017489 F15E6.9 F15E6.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F15E6.9a F15E6.9a 1950   IV: 4293621-4293735

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F15E6.9a.1 4293574 4299083 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon118889   162   IV: 4293574-4293735 Caenorhabditis elegans
Exon118891   160   IV: 4293784-4293943 Caenorhabditis elegans
Exon118893   185   IV: 4293992-4294176 Caenorhabditis elegans
Exon118897   124   IV: 4295731-4295854 Caenorhabditis elegans
Exon118899   124   IV: 4295903-4296026 Caenorhabditis elegans
Exon118901   132   IV: 4296458-4296589 Caenorhabditis elegans
Exon118903   60   IV: 4296747-4296806 Caenorhabditis elegans
Exon118905   177   IV: 4296855-4297031 Caenorhabditis elegans
Exon118907   353   IV: 4297233-4297585 Caenorhabditis elegans
Exon118909   128   IV: 4297630-4297757 Caenorhabditis elegans
Exon118911   104   IV: 4298392-4298495 Caenorhabditis elegans
Exon118913   69   IV: 4298628-4298696 Caenorhabditis elegans
Exon118915   230   IV: 4298854-4299083 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F15E6.9a.1 4293574 4299083 -1

1 Sequence

Length
2008

1 Sequence Ontology Term

Identifier Name Description
transcript