WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F15E6.9b.1 Sequence Name  F15E6.9b.1
Length (nt)  1989   Chromosome Location  IV: 4293590-4299083
Chromosome . Primary Identifier  IV Chromosome Location . Start  4293590
Chromosome Location . End  4299083 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F15E6.9b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017489 F15E6.9 F15E6.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F15E6.9b F15E6.9b 1947   IV: 4293621-4293735

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F15E6.9b.1 4293590 4299083 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon118890   146   IV: 4293590-4293735 Caenorhabditis elegans
Exon118892   160   IV: 4293784-4293943 Caenorhabditis elegans
Exon118894   185   IV: 4293992-4294176 Caenorhabditis elegans
Exon118898   124   IV: 4295731-4295854 Caenorhabditis elegans
Exon118900   124   IV: 4295903-4296026 Caenorhabditis elegans
Exon118902   132   IV: 4296458-4296589 Caenorhabditis elegans
Exon118904   60   IV: 4296747-4296806 Caenorhabditis elegans
Exon118906   174   IV: 4296858-4297031 Caenorhabditis elegans
Exon118908   353   IV: 4297233-4297585 Caenorhabditis elegans
Exon118910   128   IV: 4297630-4297757 Caenorhabditis elegans
Exon118912   104   IV: 4298392-4298495 Caenorhabditis elegans
Exon118914   69   IV: 4298628-4298696 Caenorhabditis elegans
Exon118916   230   IV: 4298854-4299083 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F15E6.9b.1 4293590 4299083 -1

1 Sequence

Length
1989

1 Sequence Ontology Term

Identifier Name Description
transcript