WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F15E6.2a Sequence Name  F15E6.2a
Length (nt)  1338   Chromosome Location  IV: 4301309-4301896
Chromosome . Primary Identifier  IV Chromosome Location . Start  4301309
Chromosome Location . End  4301896
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F15E6.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE36293 LGC-22, isoform a 49.9 445 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00044741
WBRNAi00031007
WBRNAi00066351

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F15E6.2a 4301309 4301896 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017483 lgc-22 F15E6.2 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:F15E6.2a 4301309 4301896 1
CDS:F15E6.2a 4302332 4302466 1
CDS:F15E6.2a 4302572 4302619 1
CDS:F15E6.2a 4302774 4303062 1
CDS:F15E6.2a 4304043 4304320 1

1 Sequence

Length
1338

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F15E6.2a.1 F15E6.2a.1 1469   IV: 4301306-4304448