WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W03B1.7a.1 Sequence Name  W03B1.7a.1
Length (nt)  2116   Chromosome Location  IV: 4336827-4341306
Chromosome . Primary Identifier  IV Chromosome Location . Start  4336827
Chromosome Location . End  4341306 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W03B1.7a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020976 oac-51 W03B1.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W03B1.7a W03B1.7a 2067   IV: 4336834-4336967

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W03B1.7a.1 4336827 4341306 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon118979   141   IV: 4336827-4336967 Caenorhabditis elegans
Exon118982   265   IV: 4337478-4337742 Caenorhabditis elegans
Exon118987   265   IV: 4337786-4338050 Caenorhabditis elegans
Exon118992   181   IV: 4338620-4338800 Caenorhabditis elegans
Exon118998   167   IV: 4338858-4339024 Caenorhabditis elegans
Exon119005   341   IV: 4339499-4339839 Caenorhabditis elegans
Exon119012   127   IV: 4339987-4340113 Caenorhabditis elegans
Exon119019   112   IV: 4340160-4340271 Caenorhabditis elegans
Exon119026   211   IV: 4340745-4340955 Caenorhabditis elegans
Exon119039   306   IV: 4341001-4341306 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W03B1.7a.1 4336827 4341306 1

1 Sequence

Length
2116

1 Sequence Ontology Term

Identifier Name Description
transcript