WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W03B1.7b.1 Sequence Name  W03B1.7b.1
Length (nt)  2028   Chromosome Location  IV: 4336834-4341264
Chromosome . Primary Identifier  IV Chromosome Location . Start  4336834
Chromosome Location . End  4341264 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W03B1.7b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020976 oac-51 W03B1.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W03B1.7b W03B1.7b 2028   IV: 4336834-4336967

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W03B1.7b.1 4336834 4341264 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon118980   134   IV: 4336834-4336967 Caenorhabditis elegans
Exon118983   265   IV: 4337478-4337742 Caenorhabditis elegans
Exon118986   139   IV: 4337786-4337924 Caenorhabditis elegans
Exon118988   87   IV: 4337964-4338050 Caenorhabditis elegans
Exon118993   181   IV: 4338620-4338800 Caenorhabditis elegans
Exon118999   167   IV: 4338858-4339024 Caenorhabditis elegans
Exon119006   341   IV: 4339499-4339839 Caenorhabditis elegans
Exon119013   127   IV: 4339987-4340113 Caenorhabditis elegans
Exon119020   112   IV: 4340160-4340271 Caenorhabditis elegans
Exon119027   211   IV: 4340745-4340955 Caenorhabditis elegans
Exon119033   264   IV: 4341001-4341264 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W03B1.7b.1 4336834 4341264 1

1 Sequence

Length
2028

1 Sequence Ontology Term

Identifier Name Description
transcript