WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F55F10.1b.1 Sequence Name  F55F10.1b.1
Length (nt)  13102   Chromosome Location  IV: 4360837-4386251
Chromosome . Primary Identifier  IV Chromosome Location . Start  4360837
Chromosome Location . End  4386251 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55F10.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018898 F55F10.1 F55F10.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F55F10.1b F55F10.1b 13089   IV: 4360850-4361015

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F55F10.1b.1 4360837 4386251 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon119028   179   IV: 4360837-4361015 Caenorhabditis elegans
Exon119031   191   IV: 4361064-4361254 Caenorhabditis elegans
Exon119033   434   IV: 4361305-4361738 Caenorhabditis elegans
Exon119035   133   IV: 4361795-4361927 Caenorhabditis elegans
Exon119037   1578   IV: 4362703-4364280 Caenorhabditis elegans
Exon119039   1199   IV: 4365014-4366212 Caenorhabditis elegans
Exon119041   187   IV: 4367179-4367365 Caenorhabditis elegans
Exon119043   2239   IV: 4367415-4369653 Caenorhabditis elegans
Exon119045   204   IV: 4370703-4370906 Caenorhabditis elegans
Exon119047   256   IV: 4371845-4372100 Caenorhabditis elegans
Exon119049   1207   IV: 4372887-4374093 Caenorhabditis elegans
Exon119051   459   IV: 4374732-4375190 Caenorhabditis elegans
Exon119053   187   IV: 4375835-4376021 Caenorhabditis elegans
Exon119055   887   IV: 4376800-4377686 Caenorhabditis elegans
Exon119057   508   IV: 4378668-4379175 Caenorhabditis elegans
Exon119059   246   IV: 4380038-4380283 Caenorhabditis elegans
Exon119061   2075   IV: 4380334-4382408 Caenorhabditis elegans
Exon119063   336   IV: 4383212-4383547 Caenorhabditis elegans
Exon119066   465   IV: 4384210-4384674 Caenorhabditis elegans
Exon119067   132   IV: 4386120-4386251 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F55F10.1b.1 4360837 4386251 1

1 Sequence

Length
13102

1 Sequence Ontology Term

Identifier Name Description
transcript