WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W03B1.9.1 Sequence Name  W03B1.9.1
Length (nt)  2000   Chromosome Location  IV: 4352580-4356979
Chromosome . Primary Identifier  IV Chromosome Location . Start  4352580
Chromosome Location . End  4356979 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W03B1.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020978 W03B1.9 W03B1.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W03B1.9 W03B1.9 1902   IV: 4352618-4352688

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W03B1.9.1 4352580 4356979 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon119062   109   IV: 4352580-4352688 Caenorhabditis elegans
Exon119063   601   IV: 4352743-4353343 Caenorhabditis elegans
Exon119064   186   IV: 4354268-4354453 Caenorhabditis elegans
Exon119065   135   IV: 4354499-4354633 Caenorhabditis elegans
Exon119066   263   IV: 4354691-4354953 Caenorhabditis elegans
Exon119067   266   IV: 4355010-4355275 Caenorhabditis elegans
Exon119068   158   IV: 4355749-4355906 Caenorhabditis elegans
Exon119069   112   IV: 4356606-4356717 Caenorhabditis elegans
Exon119070   107   IV: 4356764-4356870 Caenorhabditis elegans
Exon119071   63   IV: 4356917-4356979 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W03B1.9.1 4352580 4356979 -1

1 Sequence

Length
2000

1 Sequence Ontology Term

Identifier Name Description
transcript