WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y24D9A.2.1 Sequence Name  Y24D9A.2.1
Length (nt)  1983   Chromosome Location  IV: 4390844-4393406
Chromosome . Primary Identifier  IV Chromosome Location . Start  4390844
Chromosome Location . End  4393406 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y24D9A.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021282 set-21 Y24D9A.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y24D9A.2 Y24D9A.2 1707   IV: 4390868-4390928

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y24D9A.2.1 4390844 4393406 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon119083   85   IV: 4390844-4390928 Caenorhabditis elegans
Exon119084   505   IV: 4390991-4391495 Caenorhabditis elegans
Exon119085   247   IV: 4391551-4391797 Caenorhabditis elegans
Exon119086   132   IV: 4391856-4391987 Caenorhabditis elegans
Exon119087   546   IV: 4392286-4392831 Caenorhabditis elegans
Exon119088   120   IV: 4392886-4393005 Caenorhabditis elegans
Exon119089   348   IV: 4393059-4393406 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y24D9A.2.1 4390844 4393406 1

1 Sequence

Length
1983

1 Sequence Ontology Term

Identifier Name Description
transcript