WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R08C7.2d.1 Sequence Name  R08C7.2d.1
Length (nt)  324   Chromosome Location  IV: 4448718-4449656
Chromosome . Primary Identifier  IV Chromosome Location . Start  4448718
Chromosome Location . End  4449656 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R08C7.2d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019946 chat-1 R08C7.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R08C7.2d R08C7.2d 324   IV: 4448718-4448835

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R08C7.2d.1 4448718 4449656 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon119247   118   IV: 4448718-4448835 Caenorhabditis elegans
Exon119249   206   IV: 4449451-4449656 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R08C7.2d.1 4448718 4449656 1

1 Sequence

Length
324

1 Sequence Ontology Term

Identifier Name Description
transcript