WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R08C7.2c Sequence Name  R08C7.2c
Length (nt)  504   Chromosome Location  IV: 4448372-4448473
Chromosome . Primary Identifier  IV Chromosome Location . Start  4448372
Chromosome Location . End  4448473
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R08C7.2c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE39610 CHAT-1, isoform c 18.6 167 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00107875
WBRNAi00051534
WBRNAi00017578
WBRNAi00034741
WBRNAi00026064
WBRNAi00027435

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R08C7.2c 4448372 4448473 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019946 chat-1 R08C7.2 Caenorhabditis elegans

3 Locations


Feature . Primary Identifier
Start End Strand
CDS:R08C7.2c 4448372 4448473 1
CDS:R08C7.2c 4448640 4448835 1
CDS:R08C7.2c 4449451 4449656 1

1 Sequence

Length
504

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R08C7.2c.1 R08C7.2c.1 504   IV: 4448372-4449656