WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R08C7.12d.1 Sequence Name  R08C7.12d.1
Length (nt)  630   Chromosome Location  IV: 4458550-4459734
Chromosome . Primary Identifier  IV Chromosome Location . Start  4458550
Chromosome Location . End  4459734 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R08C7.12d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019955 R08C7.12 R08C7.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R08C7.12d R08C7.12d 630   IV: 4458550-4458567

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R08C7.12d.1 4458550 4459734 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon119267   18   IV: 4458550-4458567 Caenorhabditis elegans
Exon119271   150   IV: 4458743-4458892 Caenorhabditis elegans
Exon119275   376   IV: 4458945-4459320 Caenorhabditis elegans
Exon119277   86   IV: 4459649-4459734 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R08C7.12d.1 4458550 4459734 1

1 Sequence

Length
630

1 Sequence Ontology Term

Identifier Name Description
transcript