WormMine: Gene WBGene00196280

• WormBase Gene ID: WBGene00196280
• Gene Name: M01H9.7
• Sequence Name: M01H9.7
• Organism: Caenorhabditis elegans
• Automated Description: Is affected by several genes including kri-1; mpk-2; and cox-5B based on RNA-seq studies.
• Biotype: SO:0001263
• Genetic Position: :±
• Length (nt): 122

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: WBGene00196280

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:M01H9.7	M01H9.7	122	IV: 4465345-4465466

Other

0 CDSs

0 RNAi Result

5 Allele

• gk963722
• gk963908
• tm10852
• gk200181
• gk200182

1 Chromosome

• WormBase ID: IV
• Organism: Caenorhabditis elegans
• Length (nt): 17493829

1 Chromosome Location

• Feature . Primary Identifier: WBGene00196280
• Start: 4465345
• End: 4465466
• Strand: -1

2 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)

1 Downstream Intergenic Region

• WormBase ID: intergenic_region_chrIV_4463233..4465344
• Length (nt): 2112
• Chromosome Location: IV: 4463233-4465344
• Organism: Caenorhabditis elegans

5 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Transcripts that showed significantly increased expression in ogt-1(ok1474) neuronal cells isolated by FACs comparing to in FACs isolated neuronal cells from wild type.	DESeq2, fold change > 2, FDR < 0.05.	WBPaper00066485:ogt-1(ok1474)_upregulated_neuron
	Transcripts that showed significantly increased expression in cco-1(RNAi) comparing to in vector control animals.	The limma package47 was used for differential expression. Genes with a Benjamini-Hochberg adjusted P-value <0.05 and an absolute log fold change of 2 were considered differentially expressed.	WBPaper00053402:cco-1(RNAi)_upregulated
	Transcripts that showed significantly increased expression in WD61[kri-1(ok1251)] comparing to in N2.	N.A.	WBPaper00056586:kri-1(ok1251)_upregulated
Bacteria Diet: L. plantarum with pdxH mutant vs. L. plantarum	Transcripts that showed significantly increased expression in N2 animals fed with L. plantarum with pdxH mutant, comparing to in N2 animals fed with L. plantarum.	GFold3, logFC < -1 or > 1.	WBPaper00066703:L.plantarum-pdxH_upregulated
	Transcripts that showed significantly increased expression in WD483[kri-1(ok1251); mpk-2(ok219)] comparing to in N2.	N.A.	WBPaper00056586:kri-1(ok1251);mpk-2(ok219)_upregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations

• Feature . Primary Identifier: WBGene00196280
• Start: 4465345
• End: 4465466
• Strand: -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

• Length: 122

1 Sequence Ontology Term