WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:ZK180.3a Sequence Name  ZK180.3a
Length (nt)  1569   Chromosome Location  IV: 4508620-4508769
Chromosome . Primary Identifier  IV Chromosome Location . Start  4508620
Chromosome Location . End  4508769
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK180.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE07621 RFTH-1, isoform a 58.1 522 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00059265
WBRNAi00027058
WBRNAi00027558
WBRNAi00021906
WBRNAi00038220

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:ZK180.3a 4508620 4508769 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022677 rfth-1 ZK180.3 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:ZK180.3a 4508620 4508769 -1
CDS:ZK180.3a 4508820 4508940 -1
CDS:ZK180.3a 4508997 4509507 -1
CDS:ZK180.3a 4510143 4510537 -1
CDS:ZK180.3a 4510601 4510864 -1
CDS:ZK180.3a 4511124 4511209 -1
CDS:ZK180.3a 4511259 4511300 -1

1 Sequence

Length
1569

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:ZK180.3a.1 ZK180.3a.1 1702   IV: 4508496-4511309