WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK185.2.1 Sequence Name  ZK185.2.1
Length (nt)  1626   Chromosome Location  IV: 4536547-4541786
Chromosome . Primary Identifier  IV Chromosome Location . Start  4536547
Chromosome Location . End  4541786 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK185.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022682 ZK185.2 ZK185.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK185.2 ZK185.2 1512   IV: 4536553-4536635

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK185.2.1 4536547 4541786 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon119458   89   IV: 4536547-4536635 Caenorhabditis elegans
Exon119460   184   IV: 4539122-4539305 Caenorhabditis elegans
Exon119461   177   IV: 4539490-4539666 Caenorhabditis elegans
Exon119462   135   IV: 4539828-4539962 Caenorhabditis elegans
Exon119464   186   IV: 4540007-4540192 Caenorhabditis elegans
Exon119465   132   IV: 4540587-4540718 Caenorhabditis elegans
Exon119466   259   IV: 4540904-4541162 Caenorhabditis elegans
Exon119467   146   IV: 4541206-4541351 Caenorhabditis elegans
Exon119468   318   IV: 4541469-4541786 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK185.2.1 4536547 4541786 1

1 Sequence

Length
1626

1 Sequence Ontology Term

Identifier Name Description
transcript