WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F28E10.1j.1 Sequence Name  F28E10.1j.1
Length (nt)  4109   Chromosome Location  IV: 4568841-4590291
Chromosome . Primary Identifier  IV Chromosome Location . Start  4568841
Chromosome Location . End  4590291 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F28E10.1j.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017900 F28E10.1 F28E10.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F28E10.1j F28E10.1j 3888   IV: 4568841-4568894

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F28E10.1j.1 4568841 4590291 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon119523   54   IV: 4568841-4568894 Caenorhabditis elegans
Exon119526   80   IV: 4572243-4572322 Caenorhabditis elegans
Exon119536   124   IV: 4577918-4578041 Caenorhabditis elegans
Exon119543   99   IV: 4578380-4578478 Caenorhabditis elegans
Exon119548   114   IV: 4578786-4578899 Caenorhabditis elegans
Exon119555   197   IV: 4580091-4580287 Caenorhabditis elegans
Exon119563   94   IV: 4581365-4581458 Caenorhabditis elegans
Exon119571   176   IV: 4581903-4582078 Caenorhabditis elegans
Exon119578   1499   IV: 4582134-4583632 Caenorhabditis elegans
Exon119585   673   IV: 4584450-4585122 Caenorhabditis elegans
Exon119592   58   IV: 4585317-4585374 Caenorhabditis elegans
Exon119599   71   IV: 4585679-4585749 Caenorhabditis elegans
Exon119606   176   IV: 4585808-4585983 Caenorhabditis elegans
Exon119613   73   IV: 4586300-4586372 Caenorhabditis elegans
Exon119620   123   IV: 4587382-4587504 Caenorhabditis elegans
Exon119631   42   IV: 4588803-4588844 Caenorhabditis elegans
Exon119640   106   IV: 4588893-4588998 Caenorhabditis elegans
Exon119647   350   IV: 4589942-4590291 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F28E10.1j.1 4568841 4590291 1

1 Sequence

Length
4109

1 Sequence Ontology Term

Identifier Name Description
transcript