WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F28E10.1a Sequence Name  F28E10.1a
Length (nt)  3789   Chromosome Location  IV: 4572288-4572322
Chromosome . Primary Identifier  IV Chromosome Location . Start  4572288
Chromosome Location . End  4572322
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F28E10.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE44822 F28E10.1, isoform a 142.0 1262 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00000529
WBRNAi00045838
WBRNAi00014052
WBRNAi00031532

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F28E10.1a 4572288 4572322 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017900 F28E10.1 F28E10.1 Caenorhabditis elegans

17 Locations


Feature . Primary Identifier
Start End Strand
CDS:F28E10.1a 4572288 4572322 1
CDS:F28E10.1a 4577918 4578041 1
CDS:F28E10.1a 4578380 4578478 1
CDS:F28E10.1a 4578786 4578899 1
CDS:F28E10.1a 4580091 4580287 1
CDS:F28E10.1a 4581365 4581458 1
CDS:F28E10.1a 4581903 4582078 1
CDS:F28E10.1a 4582134 4583632 1
CDS:F28E10.1a 4584450 4585122 1
CDS:F28E10.1a 4585317 4585374 1
CDS:F28E10.1a 4585679 4585749 1
CDS:F28E10.1a 4585808 4585983 1
CDS:F28E10.1a 4586300 4586372 1
CDS:F28E10.1a 4587382 4587504 1
CDS:F28E10.1a 4588803 4588844 1
CDS:F28E10.1a 4588893 4588998 1
CDS:F28E10.1a 4589942 4590070 1

1 Sequence

Length
3789

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F28E10.1a.1 F28E10.1a.1 4016   IV: 4572288-4590297