WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F28E10.1d.1 Sequence Name  F28E10.1d.1
Length (nt)  4175   Chromosome Location  IV: 4575948-4590292
Chromosome . Primary Identifier  IV Chromosome Location . Start  4575948
Chromosome Location . End  4590292 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F28E10.1d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017900 F28E10.1 F28E10.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F28E10.1d F28E10.1d 3795   IV: 4576106-4576146

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F28E10.1d.1 4575948 4590292 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon119532   199   IV: 4575948-4576146 Caenorhabditis elegans
Exon119534   124   IV: 4577918-4578041 Caenorhabditis elegans
Exon119541   99   IV: 4578380-4578478 Caenorhabditis elegans
Exon119546   114   IV: 4578786-4578899 Caenorhabditis elegans
Exon119553   197   IV: 4580091-4580287 Caenorhabditis elegans
Exon119561   94   IV: 4581365-4581458 Caenorhabditis elegans
Exon119568   176   IV: 4581903-4582078 Caenorhabditis elegans
Exon119575   1499   IV: 4582134-4583632 Caenorhabditis elegans
Exon119582   673   IV: 4584450-4585122 Caenorhabditis elegans
Exon119589   58   IV: 4585317-4585374 Caenorhabditis elegans
Exon119596   71   IV: 4585679-4585749 Caenorhabditis elegans
Exon119603   176   IV: 4585808-4585983 Caenorhabditis elegans
Exon119610   73   IV: 4586300-4586372 Caenorhabditis elegans
Exon119617   123   IV: 4587382-4587504 Caenorhabditis elegans
Exon119626   42   IV: 4588803-4588844 Caenorhabditis elegans
Exon119635   106   IV: 4588893-4588998 Caenorhabditis elegans
Exon119648   351   IV: 4589942-4590292 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F28E10.1d.1 4575948 4590292 1

1 Sequence

Length
4175

1 Sequence Ontology Term

Identifier Name Description
transcript