WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F28E10.1h.1 Sequence Name  F28E10.1h.1
Length (nt)  3150   Chromosome Location  IV: 4581435-4590070
Chromosome . Primary Identifier  IV Chromosome Location . Start  4581435
Chromosome Location . End  4590070 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F28E10.1h.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017900 F28E10.1 F28E10.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F28E10.1h F28E10.1h 3150   IV: 4581435-4581458

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F28E10.1h.1 4581435 4590070 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon119564   24   IV: 4581435-4581458 Caenorhabditis elegans
Exon119569   176   IV: 4581903-4582078 Caenorhabditis elegans
Exon119576   1499   IV: 4582134-4583632 Caenorhabditis elegans
Exon119583   673   IV: 4584450-4585122 Caenorhabditis elegans
Exon119590   58   IV: 4585317-4585374 Caenorhabditis elegans
Exon119597   71   IV: 4585679-4585749 Caenorhabditis elegans
Exon119604   176   IV: 4585808-4585983 Caenorhabditis elegans
Exon119611   73   IV: 4586300-4586372 Caenorhabditis elegans
Exon119618   123   IV: 4587382-4587504 Caenorhabditis elegans
Exon119629   42   IV: 4588803-4588844 Caenorhabditis elegans
Exon119638   106   IV: 4588893-4588998 Caenorhabditis elegans
Exon119645   129   IV: 4589942-4590070 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F28E10.1h.1 4581435 4590070 1

1 Sequence

Length
3150

1 Sequence Ontology Term

Identifier Name Description
transcript