WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F19C7.2.1 Sequence Name  F19C7.2.1
Length (nt)  1679   Chromosome Location  IV: 4599954-4602778
Chromosome . Primary Identifier  IV Chromosome Location . Start  4599954
Chromosome Location . End  4602778 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F19C7.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017592 F19C7.2 F19C7.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F19C7.2 F19C7.2 1623   IV: 4599955-4600167

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F19C7.2.1 4599954 4602778 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon119672   214   IV: 4599954-4600167 Caenorhabditis elegans
Exon119673   584   IV: 4600439-4601022 Caenorhabditis elegans
Exon119674   109   IV: 4601225-4601333 Caenorhabditis elegans
Exon119675   96   IV: 4601379-4601474 Caenorhabditis elegans
Exon119676   112   IV: 4601520-4601631 Caenorhabditis elegans
Exon119677   103   IV: 4601687-4601789 Caenorhabditis elegans
Exon119678   344   IV: 4602270-4602613 Caenorhabditis elegans
Exon119679   117   IV: 4602662-4602778 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F19C7.2.1 4599954 4602778 1

1 Sequence

Length
1679

1 Sequence Ontology Term

Identifier Name Description
transcript