WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F19C7.8d.1 Sequence Name  F19C7.8d.1
Length (nt)  987   Chromosome Location  IV: 4610901-4626461
Chromosome . Primary Identifier  IV Chromosome Location . Start  4610901
Chromosome Location . End  4626461 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F19C7.8d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017597 F19C7.8 F19C7.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F19C7.8d F19C7.8d 987   IV: 4610901-4611005

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F19C7.8d.1 4610901 4626461 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon119713   105   IV: 4610901-4611005 Caenorhabditis elegans
Exon119717   124   IV: 4611991-4612114 Caenorhabditis elegans
Exon119722   133   IV: 4612159-4612291 Caenorhabditis elegans
Exon119727   126   IV: 4612337-4612462 Caenorhabditis elegans
Exon119732   114   IV: 4613150-4613263 Caenorhabditis elegans
Exon119736   76   IV: 4617230-4617305 Caenorhabditis elegans
Exon119740   128   IV: 4617388-4617515 Caenorhabditis elegans
Exon119743   46   IV: 4623629-4623674 Caenorhabditis elegans
Exon119746   135   IV: 4626327-4626461 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F19C7.8d.1 4610901 4626461 -1

1 Sequence

Length
987

1 Sequence Ontology Term

Identifier Name Description
transcript